7c46815c043778347ef0bde852c58054 *DESCRIPTION
42028edf2ccc4e4ad11de060696b3dc6 *NAMESPACE
76aef856f8b331b5c078a98ecb29153e *NEWS
9eb6a92f7ca673c920011d4be5f13d50 *R/AllClasses.R
817360798ad5ef1a0563842c2bef4d56 *R/AllGenerics.R
789523894a994f3783cd443914500bee *R/GSVA-package.R
59574ae6e07d16e21f7b02a200a68ac6 *R/GSVA-pkg-defunct.R
18db387789f75bbdcd66672324a13416 *R/GSVA-pkg-deprecated.R
354e1148562753ded0e072f35b848b21 *R/GsvaMethodParam.R
12e4d21738ebc2b671440e318ab064f4 *R/genesets.R
6176264f82cb9446dada6cfb04e58e0d *R/gsva-global.R
9c4cfefefcad62c65e07cd6649a28b94 *R/gsva.R
5514e5f6fec3029def3dbf0e3c021a2f *R/gsvaDelayedArray.R
a5441ced20b1c997cb9a416a971dce37 *R/gsvaNewAPI.R
4b1bc7f768a0e6700fdd7299abf8ea0d *R/gsvaParam.R
165007e14dadffab4231ba3c098940e0 *R/methods-ShinyApp.R
6a2e7610bae5ac4df3810811ea117755 *R/plage.R
440f446979360f28a1ba139f9562d92e *R/plageParam.R
99270a1f3a3eb14a681da6418fdf18d7 *R/spatial.R
61f9529a025a35f25e8b469bce263f3b *R/ssgsea.R
ee83420e338a8228e99e8d52214d5f6f *R/ssgseaParam.R
80a07c175d454bfb0f4f161d908f8ea6 *R/utils.R
51586e990aece5f06fa725f6f7a16450 *R/zscore.R
7073605a6775b2a7b495a50a1ed77544 *R/zscoreParam.R
9c6efd7ddf2d97709f75552290099051 *R/zzz.R
37a7cdb041349afae7062bd64f253e21 *README.md
db5b8171cf7633cf564b9c08d9d76ad8 *build/vignette.rds
453d5f90bd6225b9bbf8fa9b9dd1e516 *cleanup
f1b7a918db657cba60304eb978b2450f *inst/CITATION
7dbc3b4b72ec1b13422cfc89fd4ccccb *inst/doc/GSVA.R
d3130db2c26617026c04e6741d5e856d *inst/doc/GSVA.Rmd
2b229c6b1834116a0b727e90325050ae *inst/doc/GSVA.html
d6e6f1223267a06705b40afe7dca4a97 *inst/extdata/cache4vignette_leukemia_es.RData
bf968c2f1b5abd82360ced0ad33aae9e *inst/shinyApp/argumentsDataModule.R
25e2b694159c4e7d07f774614d9a3c58 *inst/shinyApp/closeModule.R
dc214dc088b1cd01628804b5296afb06 *inst/shinyApp/downloadModule.R
9cdb81086c4211775369cd3474d469e8 *inst/shinyApp/geneSetsModule.R
2c65b8e76c0322d7ed8ee293f2c898ec *inst/shinyApp/global.R
864045a809dcb3b5279972f874e20318 *inst/shinyApp/matrixModule.R
15da683e3de9cbf03c45be58a0de0d41 *inst/shinyApp/modalGSVAModule.R
d767155a0a53077a837552b5a9537ce8 *inst/shinyApp/plot1_Module.R
56a93a0297bd15075a35e940e6718571 *inst/shinyApp/plot2_Module.R
7fb0745614ce1f6818ae24101df1f571 *inst/shinyApp/plot3_Module.R
b651b3e5eb4ace75f5358a3d900c8057 *inst/shinyApp/server.R
bed624bd4a37319dce3c5d3351299803 *inst/shinyApp/ui.R
c6fd28f6180768396f84bf00f43a644f *inst/shinyApp/www/GSVA.png
871bcb8b39094743ba2792a9e8f0017c *inst/shinyApp/www/style.css
5e25c48b6466aa65e8bd6a66805cf7a0 *inst/unitTests/test_gsvaCcode.R
2b631ae03633fefa230caa151ec5ba1f *inst/unitTests/test_gsvaRanks.R
c8ff034b42e39ec122f4a4d6cb07a0fc *inst/unitTests/test_inputdatacontainers.R
704e4200f263b573455ec9bd5d52f832 *inst/unitTests/test_newAPI.R
da861e4c94aa751166f72340321f6b5e *inst/unitTests/test_params.R
89452b3c7fdbf7ea365c5f6f14881abf *inst/unitTests/test_sparse.R
9775e961ead52fbedfcc2aa117c2f888 *inst/unitTests/test_ssgsea.R
4153267586686f5e31be31334a77281a *man/GSVA-pkg-defunct.Rd
3d0d25909987fa708c944470179e4766 *man/GSVA-pkg-deprecated.Rd
afb4a867fe3d4afbf93e720be86d3068 *man/GsvaExprData-class.Rd
c9dfafa2c3ed72b89da778bf90f8a484 *man/GsvaGeneSets-class.Rd
2c91ff3b5357eb6ce2057dbbad59b913 *man/GsvaMethodParam-class.Rd
b9a450cf9f6b69fa27fcb0d40c18cb91 *man/computeGeneSetsOverlap.Rd
b944c29ab79b635360f9f92b0836a4f0 *man/deduplicateGeneSets.Rd
7e46d890bd243147c0b792340742cde2 *man/filterGeneSets.Rd
ef5d3ea4a9485e59c5922b39798b9f32 *man/geneIdsToGeneSetCollection.Rd
225fc7a8d5e2810ab0fe565a805edb7b *man/geneSets.Rd
f7748da991082a28edcf857d66143a9f *man/gsva-defunct.Rd
44457ac9e4ba00e44dacdaa806718ba3 *man/gsva.Rd
e371602fa1895f0ef4bdd8f0c387269c *man/gsvaAnnotation.Rd
6ba31cadfeb8f369ef76eaa4e0022ba4 *man/gsvaEnrichment.Rd
b95a5508dee76ab90b7b957f1088da5f *man/gsvaParam-class.Rd
1179e68118ddc3493418d61073e0b7c1 *man/gsvaRanks.Rd
f0a5a0ef98e0ab07b190f12d0999af4b *man/guessGeneIdType.Rd
d4def58986783657316ee233aa91d39b *man/igsva.Rd
e564c90ee0950d1d1438c97126028b37 *man/plageParam-class.Rd
ce0a7333f464a66d2f66ed7b09b6e7a1 *man/readGMT.Rd
359d575a8dccf3e69872c899b4e11ee5 *man/spatCor.Rd
6b976d21c05b18ba8944f1305f6dbd70 *man/ssgseaParam-class.Rd
183fe93cbeb6c73b2bb7c4e1149094d1 *man/zscoreParam-class.Rd
726b17e8b54c59f01e096f7ef9549ac4 *src/ecdfvals.c
310c702bfb7bd62da14241f7e82bc82b *src/kcdfvals.c
a1af4ee6af7db87b24bb203119e0f55c *src/kernel_estimation.c
30bcfc21643951ceef76d83c4bba42aa *src/ks_test.c
e563741ce215b19ed13ae18c518b3444 *src/register_cmethods.c
f2b2e0fe9759f4784e946a7df7dae105 *src/utils.c
f2310c7773e0506a7998fe8de54969ac *tests/runTests.R
ea3df3394fd093071dd5830f78d6359c *tests/test_gsva_newapi.R
b1a5a4d3db2331a32c105f81de2042a9 *tests/test_gsva_newapi.Rout.save
91d9be4b574942def7b5dec91329e95e *tests/test_plage_newapi.R
8fdd1204271be0e2fe96525888105a6e *tests/test_plage_newapi.Rout.save
d5cb14bee2b3e61b6f02a154db405725 *tests/test_ssgsea_newapi.R
9c85c07b084ae907c87b25531b136ac2 *tests/test_ssgsea_newapi.Rout.save
bca5017b0508a32d68eb3f4a6d923236 *tests/test_zscore_newapi.R
217381ebe3b1305fb539d34ac9004a5a *tests/test_zscore_newapi.Rout.save
d3130db2c26617026c04e6741d5e856d *vignettes/GSVA.Rmd
44ae81dca23872544a5d37fc6258479f *vignettes/GSVA.bib
7f8eb02c3a715cc27c9e6954bd8d3b38 *vignettes/methods.png
a407c8f86caaae0ecbe41d26a3e88319 *vignettes/webapp1.png
93e0a4fffed5119c01f62a4751d13f03 *vignettes/webapp2.png
